Shen LabGenomics and Bioinformatics

Public Tools

MAGPIE

Multimodal Analysis Generated Pathogenic Impact Evaluator.

Webserver

SpTransformer

A deep learning tool designed to predict tissue-specific splicing sites from pre-mRNA sequences.

Webserver

Anchored-fusion

A bioinformatic tool that detects fusion genes from paired-end RNA sequencing with high sensitivity.

GitHub repository

RESA

A method for detecting expressed somatic mutations with high precision directly from scRNA-seq data.

GitHub repository